Basic Information
Locus ID:
BH04.1183
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
ADP binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 18788580 | 18795455 | - | BH04.1183 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 119,622.29 Da | 54.66 | 91.30 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09272 | RNase_HI_RT_Ty1 | 928 | 1038 | 1.4566E-47 | - |
| Pfam | PF00931 | NB-ARC domain | 445 | 679 | 1.4E-35 | IPR002182 |
| Pfam | PF00069 | Protein kinase domain | 3 | 242 | 5.1E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 251 | 5.12E-50 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 428 | 694 | 1.25E-50 | IPR027417 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 55 | 262 | 1.3E-46 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 425 | 584 | 4.7E-30 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 591 | 682 | 6.4E-6 | IPR042197 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 36 | 3.2E-6 | - |
| SMART | SM00220 | serkin_6 | 1 | 243 | 2.6E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 258 | 29.658091 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 98 | 110 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 529 | 543 | 3.5E-13 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 462 | 477 | 3.5E-13 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 626 | 640 | 3.5E-13 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14470.1 | NB-ARC domain-containing disease resistance protein. | 8.1E-44 |
| RefSeq | XP_039801335.1 | putative disease resistance protein RGA3 isoform X1 [Panicum virgatum] | 0 |
| Q7XA42 | Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2 | 2.1E-48 | |
| TrEMBL | A0A8T0WC75 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2KG120600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||