Basic Information
Locus ID:
BH04.1153
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 17768579 | 17782209 | - | BH04.1153 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 98,558.59 Da | 33.27 | 93.31 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 587 | 859 | 4.76372E-90 | - |
| Pfam | PF00069 | Protein kinase domain | 583 | 854 | 3.5E-50 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 374 | 429 | 5.1E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 564 | 856 | 5.4E-81 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 62 | 438 | 3.61E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 542 | 657 | 7.3E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 309 | 1.0E-67 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 327 | 449 | 6.8E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 658 | 877 | 9.9E-60 | - |
| SMART | SM00369 | LRR_typ_2 | 89 | 111 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 185 | 208 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 236 | 260 | 320.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 581 | 860 | 3.9E-50 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 392 | 415 | 0.46 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 112 | 135 | 0.061 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 581 | 860 | 41.276241 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 705 | 717 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 587 | 608 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 395 | 408 | 1.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 416 | 429 | 1.8E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 453 | 474 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 474 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 7.19E-170 |
| RefSeq | XP_004979222.1 | receptor-like kinase TMK4 [Setaria italica] | 0 |
| Q2R560 | Receptor protein kinase WSS1 OS=Oryza sativa subsp. japonica OX=39947 GN=WSS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A368S6P4 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_8G112900v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH04.1153, CH04.1339 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_4BG0351990, gene-QOZ80_9AG0681760 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0374020.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_067050 |
| Poaceae | Oryza coarctata | 2 | Oco21G005150, Oco22G006180 |
| Poaceae | Oryza sativa | 2 | LOC_Os08g41430.1, LOC_Os11g26130.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G135600 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr05G021660, Chr07G018000, Chr31G004400 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G266400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG023700, gene_TRIDC4BG025710 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G147700.1, TraesCS4B02G165600.1.cds1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb112700_P001, Zm00001eb169350_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-38701 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18762 |