Basic Information
Locus ID:
BH03.797
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 9936237 | 9945687 | - | BH03.797 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.24 | 112,393.73 Da | 59.43 | 79.88 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 303 | 341 | 6.9E-6 | IPR001810 |
| Pfam | PF00646 | F-box domain | 20 | 56 | 1.8E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 300 | 366 | 8.76E-12 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 66 | 2.75E-11 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 408 | 623 | 9.42E-14 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 97 | 226 | 6.91E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 74 | 237 | 1.7E-5 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 16 | 60 | 1.7E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 391 | 632 | 6.8E-11 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 299 | 351 | 1.2E-7 | - |
| SMART | SM00256 | fbox_2 | 306 | 345 | 4.0E-4 | IPR001810 |
| SMART | SM00256 | fbox_2 | 23 | 62 | 4.9E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 300 | 336 | 9.762413 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 17 | 53 | 9.68293 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 682 | 708 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 913 | 927 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 737 | 758 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 777 | 809 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 999 | 1024 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 833 | 940 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 263 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 844 | 858 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G13985.1 | FBD-associated F-box protein. | 2.44E-17 |
| RefSeq | XP_025804601.1 | MEIOTIC F-BOX protein MOF-like isoform X2 [Panicum hallii] | 8.83E-161 |
| Q4PSI6 | FBD-associated F-box protein At4g13985 OS=Arabidopsis thaliana OX=3702 GN=At4g13985 PE=2 SV=1 | 2.41E-16 | |
| TrEMBL | A0A3L6T8H1 | F-box domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM03G24150 PE=4 SV=1 | 1.35E-163 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology