Basic Information
Locus ID:
BH03.635
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 7787397 | 7802517 | - | BH03.635 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.53 | 149,552.27 Da | 55.92 | 81.41 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 354 | 389 | 7.4E-7 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 1198 | 1303 | 1.4E-4 | IPR013187 |
| Pfam | PF00646 | F-box domain | 1051 | 1087 | 1.3E-8 | IPR001810 |
| Pfam | PF00646 | F-box domain | 722 | 757 | 3.4E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 347 | 402 | 2.22E-13 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 718 | 777 | 4.97E-14 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 1045 | 1103 | 3.4E-15 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1047 | 1088 | 1.5E-7 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 353 | 390 | 2.2E-7 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 719 | 767 | 7.8E-7 | - |
| SMART | SM00256 | fbox_2 | 1051 | 1091 | 7.4E-10 | IPR001810 |
| SMART | SM00256 | fbox_2 | 354 | 394 | 1.2E-8 | IPR001810 |
| SMART | SM00256 | fbox_2 | 722 | 762 | 4.9E-7 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 1161 | 1334 | 1.0E-10 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1045 | 1091 | 10.424773 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 716 | 762 | 9.947874 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 348 | 394 | 9.815402 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 625 | 670 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 105 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17490.1 | F-box and associated interaction domains-containing protein. | 1.12E-6 |
| RefSeq | XP_002461646.1 | F-box/kelch-repeat protein At4g19930 [Sorghum bicolor] | 2.71E-124 |
| Q6Z4U2 | CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0174900 PE=3 SV=1 | 5.37E-6 | |
| TrEMBL | A0A1W0W2R7 | F-box domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3002G069900 PE=4 SV=1 | 4.26E-125 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||