Basic Information
Locus ID:
BH03.557
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 6873842 | 6875778 | - | BH03.557 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 49,893.43 Da | 63.84 | 58.46 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 19 | 53 | 2.1E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 65 | 4.19E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 17 | 59 | 6.4E-10 | - |
| SMART | SM00256 | fbox_2 | 19 | 59 | 5.5E-8 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 13 | 59 | 8.649649 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 227 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 395 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 243 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62510.1 | F-box family protein. | 1.62E-8 |
| RefSeq | XP_004959021.1 | putative F-box protein At1g47790 [Setaria italica] | 3.03E-60 |
| Q9FJJ4 | F-box protein At5g62510 OS=Arabidopsis thaliana OX=3702 GN=At5g62510 PE=2 SV=1 | 1.61E-7 | |
| TrEMBL | K4A0F2 | F-box domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 3.23E-59 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||