Basic Information
Locus ID:
BH03.549
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 6776087 | 6779775 | + | BH03.549 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 67,646.27 Da | 34.77 | 81.05 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 361 | 396 | 1.13048E-5 | - |
| Pfam | PF00069 | Protein kinase domain | 445 | 612 | 9.3E-33 | IPR000719 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 358 | 405 | 4.73E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 443 | 616 | 5.47E-51 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 364 | 407 | 1.3E-7 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 320 | 363 | 6.3E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 417 | 518 | 7.4E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 519 | 621 | 9.8E-27 | - |
| SMART | SM00181 | egf_5 | 313 | 360 | 46.0 | IPR000742 |
| SMART | SM00220 | serkin_6 | 443 | 621 | 5.6E-10 | IPR000719 |
| SMART | SM00179 | egfca_6 | 361 | 404 | 1.1E-7 | IPR001881 |
| SMART | SM00181 | egf_5 | 364 | 404 | 5.4E-4 | IPR000742 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 361 | 404 | 11.038623 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 443 | 621 | 29.898369 | IPR000719 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 379 | 390 | - | IPR000152 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 361 | 388 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 449 | 471 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 564 | 576 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 1.17E-71 |
| RefSeq | XP_025804054.1 | wall-associated receptor kinase 4-like [Panicum hallii] | 3.64E-307 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 1.14E-70 | |
| TrEMBL | A0A2S3GW56 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_2G056500 PE=4 SV=1 | 8.22E-306 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology