Basic Information
Locus ID:
BH03.547
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 6770015 | 6773684 | - | BH03.547 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 51,033.12 Da | 35.07 | 99.56 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 191 | 449 | 3.56342E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 186 | 449 | 2.6E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 185 | 451 | 7.24E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 167 | 259 | 4.3E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 260 | 456 | 5.2E-54 | - |
| SMART | SM00220 | serkin_6 | 185 | 451 | 2.0E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 185 | 458 | 36.301071 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 191 | 213 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 305 | 317 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 3.92E-88 |
| RefSeq | XP_004959010.1 | wall-associated receptor kinase 2 [Setaria italica] | 1.41E-278 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 3.82E-87 | |
| TrEMBL | A0A4U6VMB5 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G065700v2 PE=4 SV=1 | 4.54E-277 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology