HalophFGD

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Basic Information
Locus ID: BH03.518
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
BH03 6539060 6540443 - BH03.518
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.64 45,773.87 Da 47.13 83.28 -0.21
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 6 40 1.7E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 5 61 2.49E-9 IPR036047
SMART SM00256 fbox_2 7 48 0.0087 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044948215.1 uncharacterized protein LOC123397744 [Hordeum vulgare subsp. vulgare] 3.72E-52
TrEMBL A0A8T0VBJ4 F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2NG059300 PE=4 SV=1 1.55E-116
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 8 BH03.1751, BH03.516, BH03.517, BH03.518, CH03.607, CH03.608 ...
CH03.609, CH03.611
Poaceae Paspalum vaginatum 1 gene-BS78_02G152300
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.