HalophFGD

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Basic Information
Locus ID: BH03.516
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
BH03 6530588 6531898 - BH03.516
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.05 47,677.95 Da 50.14 88.65 -0.13
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 8 43 1.1E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 5 51 4.32E-9 IPR036047
Gene3D G3DSA:1.20.1280.50 - 3 48 8.4E-7 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044401213.1 uncharacterized protein LOC123124704 [Triticum aestivum] 8.93E-43
TrEMBL A0A8T0VBJ4 F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2NG059300 PE=4 SV=1 2.35E-106
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 8 BH03.1751, BH03.516, BH03.517, BH03.518, CH03.607, CH03.608 ...
CH03.609, CH03.611
Poaceae Paspalum vaginatum 1 gene-BS78_02G152300
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