Basic Information
Locus ID:
BH03.469
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein FAR1-RELATED SEQUENCE
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 5946778 | 5954549 | + | BH03.469 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 169,792.14 Da | 48.63 | 67.88 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10536 | Plant mobile domain | 929 | 1264 | 1.3E-60 | IPR019557 |
| Pfam | PF10551 | MULE transposase domain | 352 | 444 | 3.0E-23 | IPR018289 |
| Pfam | PF03101 | FAR1 DNA-binding domain | 150 | 228 | 5.9E-14 | IPR004330 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 636 | 672 | 9.173618 | IPR007527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1487 | 1510 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 786 | 839 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1463 | 1532 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1367 | 1438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 789 | 815 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1466 | 1484 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 86 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38180.1 | FAR1-related sequence 5. | 2.62E-65 |
| RefSeq | XP_039793600.1 | protein FAR1-RELATED SEQUENCE 9-like [Panicum virgatum] | 0 |
| Q9SZL8 | Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1 | 2.56E-64 | |
| TrEMBL | A0A835F8V6 | Protein FAR1-RELATED SEQUENCE OS=Digitaria exilis OX=1010633 GN=HU200_016092 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology