Basic Information
Locus ID:
BH03.4488
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 52247163 | 52251525 | + | BH03.4488 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 117,593.42 Da | 38.99 | 83.15 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01490 | Ube1_repeat2 | 471 | 1010 | 0.0 | - |
| CDD | cd01491 | Ube1_repeat1 | 54 | 439 | 3.7484E-152 | - |
| Pfam | PF00899 | ThiF family | 56 | 432 | 5.3E-28 | IPR000594 |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 301 | 370 | 1.4E-22 | IPR032420 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 229 | 299 | 2.9E-26 | IPR032418 |
| Pfam | PF00899 | ThiF family | 452 | 951 | 1.9E-72 | IPR000594 |
| Pfam | PF09358 | Ubiquitin fold domain | 963 | 1052 | 1.4E-22 | IPR018965 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 639 | 892 | 1.7E-84 | IPR019572 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 447 | 947 | 2.75E-129 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 48 | 437 | 3.01E-99 | IPR035985 |
| Gene3D | G3DSA:3.50.50.80 | - | 46 | 163 | 8.3E-36 | IPR042449 |
| Gene3D | G3DSA:2.40.30.180 | - | 217 | 298 | 1.9E-112 | IPR042302 |
| Gene3D | G3DSA:3.40.50.12550 | - | 174 | 462 | 1.9E-112 | - |
| Gene3D | G3DSA:3.40.50.720 | - | 472 | 951 | 3.7E-192 | - |
| Gene3D | G3DSA:1.10.10.2660 | - | 624 | 899 | 3.7E-192 | IPR042063 |
| Gene3D | G3DSA:3.10.290.60 | - | 965 | 1055 | 5.4E-21 | IPR038252 |
| SMART | SM00985 | UBA_e1_C_a_2 | 930 | 1052 | 9.6E-46 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 49 | 1057 | 0.0 | IPR018075 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 631 | 639 | - | IPR033127 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 414 | 422 | - | IPR018074 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 499 | 522 | 4.2E-63 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 76 | 100 | 4.2E-63 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 191 | 218 | 4.2E-63 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 700 | 727 | 4.2E-63 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 546 | 571 | 4.2E-63 | IPR000011 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 50 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06460.1 | ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. | 0 |
| RefSeq | XP_025802919.1 | ubiquitin-activating enzyme E1 3 isoform X1 [Panicum hallii] | 0 |
| P31252 | Ubiquitin-activating enzyme E1 3 OS=Triticum aestivum OX=4565 GN=UBA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6TCZ7 | E1 ubiquitin-activating enzyme OS=Panicum miliaceum OX=4540 GN=C2845_PM03G17100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology