Basic Information
Locus ID:
BH03.4328
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 50897970 | 50901524 | - | BH03.4328 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 71,959.12 Da | 33.86 | 88.12 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 161 | 251 | 1.1E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 33 | 133 | 2.5E-10 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 320 | 619 | 3.8E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 301 | 635 | 9.19E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 352 | 427 | 1.9E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 281 | 346 | 2.0E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 428 | 632 | 4.2E-52 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 29 | 137 | 1.2E-12 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 146 | 255 | 1.5E-17 | IPR038408 |
| SMART | SM00220 | serkin_6 | 316 | 619 | 1.6E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 316 | 634 | 36.103195 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 29 | 137 | 13.827533 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 143 | 255 | 16.452642 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 473 | 485 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 4.12E-111 |
| RefSeq | XP_052163199.1 | cysteine-rich receptor-like protein kinase 25 [Oryza glaberrima] | 3.78E-279 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 3.99E-110 | |
| TrEMBL | A0A835AZE0 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_045728 PE=4 SV=1 | 3.65E-292 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.4000, BH03.4328, BH03.4330, CH07.183 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0580800, gene-QOZ80_7BG0611960 |
| Poaceae | Oryza coarctata | 1 | Oco13G015250 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g47230.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G383200 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr19G000630, Chr27G016880 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-150 |