Basic Information
Locus ID:
BH03.4248
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
RhoGAP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 49654348 | 49661801 | + | BH03.4248 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 95,530.40 Da | 56.72 | 78.14 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00159 | RhoGAP | 188 | 327 | 1.10629E-31 | - |
| CDD | cd00821 | PH | 28 | 127 | 1.59988E-12 | - |
| Pfam | PF00620 | RhoGAP domain | 188 | 332 | 4.2E-30 | IPR000198 |
| Pfam | PF00169 | PH domain | 27 | 131 | 5.8E-13 | IPR001849 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 615 | 695 | 4.1E-22 | IPR025757 |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 188 | 382 | 1.57E-32 | IPR008936 |
| SUPERFAMILY | SSF50729 | PH domain-like | 21 | 138 | 6.3E-18 | - |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 158 | 381 | 6.6E-41 | IPR008936 |
| Gene3D | G3DSA:2.30.29.30 | - | 15 | 134 | 1.2E-17 | IPR011993 |
| SMART | SM00324 | RhoGAP_3 | 185 | 376 | 4.8E-25 | IPR000198 |
| SMART | SM00233 | PH_update | 26 | 134 | 7.0E-16 | IPR001849 |
| ProSiteProfiles | PS50003 | PH domain profile. | 25 | 132 | 15.8212 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 179 | 379 | 29.677536 | IPR000198 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 778 | 795 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 503 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 535 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 759 | 795 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 546 | 567 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 423 | - | - |
| Coils | Coil | Coil | 818 | 838 | - | - |
| Coils | Coil | Coil | 605 | 639 | - | - |
| Coils | Coil | Coil | 664 | 698 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_004958566.1 | rho GTPase-activating protein 7 isoform X4 [Setaria italica] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | K3ZQL8 | Rho GTPase-activating protein 7-like OS=Setaria italica OX=4555 GN=101765349 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology