Basic Information
Locus ID:
BH03.401
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 5182937 | 5184055 | + | BH03.401 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 17,462.97 Da | 31.78 | 84.16 | 0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 25 | 123 | 2.22423E-38 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 37 | 117 | 1.0E-22 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 23 | 124 | 4.88E-33 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 24 | 133 | 6.4E-34 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 24 | 125 | 36.374596 | IPR003245 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 16 | 5.0 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60280.1 | uclacyanin 3. Encodes blue copper-binding protein III. | 6.84E-18 |
| RefSeq | XP_004955556.1 | basic blue protein [Setaria italica] | 5.88E-66 |
| G7L0H3 | Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1 | 4.39E-23 | |
| TrEMBL | K3ZZ63 | Phytocyanin domain-containing protein OS=Setaria italica OX=4555 GN=101763848 PE=4 SV=1 | 1.33E-64 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology