Basic Information
Locus ID:
BH03.3972
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 47766243 | 47770311 | - | BH03.3972 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 109,874.63 Da | 50.29 | 76.15 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 718 | 975 | 2.07971E-107 | - |
| CDD | cd06410 | PB1_UP2 | 129 | 217 | 3.02639E-28 | - |
| Pfam | PF00564 | PB1 domain | 135 | 205 | 6.0E-11 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 715 | 975 | 1.8E-64 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 703 | 974 | 1.05E-75 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 136 | 221 | 3.63E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 800 | 986 | 9.0E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 705 | 799 | 3.9E-23 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 138 | 218 | 4.2E-5 | - |
| SMART | SM00666 | PB1_new | 134 | 219 | 1.9E-16 | IPR000270 |
| SMART | SM00220 | serkin_6 | 712 | 978 | 3.6E-58 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 712 | 979 | 42.124279 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 837 | 849 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 794 | 807 | 6.3E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 831 | 849 | 6.3E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 902 | 924 | 6.3E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 946 | 968 | 6.3E-15 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 623 | 643 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 627 | 643 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16270.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 1.0E-144 |
| RefSeq | XP_034581268.1 | uncharacterized protein LOC117844642 [Setaria viridis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 1.27E-132 | |
| TrEMBL | A0A4U6W2I2 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G400400v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology