Basic Information
Locus ID:
BH03.3923
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 47349949 | 47350719 | + | BH03.3923 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 17,497.82 Da | 32.84 | 87.20 | 0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 26 | 123 | 3.24997E-47 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 36 | 117 | 1.6E-26 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 25 | 124 | 2.94E-35 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 24 | 129 | 3.6E-38 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 26 | 125 | 40.2015 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26720.1 | Cupredoxin superfamily protein. | 1.5E-26 |
| RefSeq | XP_025798160.1 | basic blue protein-like [Panicum hallii] | 9.92E-89 |
| G7L0H3 | Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1 | 3.59E-34 | |
| TrEMBL | A0A2S3IH92 | Phytocyanin domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_9G056300 PE=4 SV=1 | 2.24E-87 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology