Basic Information
Locus ID:
BH03.3909
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 47265473 | 47266082 | + | BH03.3909 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 17,039.32 Da | 25.33 | 83.77 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 65 | 161 | 1.7803E-42 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 75 | 155 | 1.5E-21 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 65 | 161 | 1.91E-28 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 64 | 162 | 2.1E-29 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 65 | 162 | 32.789543 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25090.1 | early nodulin-like protein 13. | 4.0E-9 |
| RefSeq | XP_039825656.1 | blue copper protein-like [Panicum virgatum] | 7.23E-53 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 2.75E-21 | |
| TrEMBL | A0A8T0MDE6 | Phytocyanin domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9NG075045 PE=4 SV=1 | 1.64E-51 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology