Basic Information
Locus ID:
BH03.3863
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
WPP domain-associated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 46957513 | 46966705 | - | BH03.3863 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 151,060.98 Da | 50.26 | 85.93 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06572 | Histidinol_dh | 954 | 1344 | 0.0 | IPR012131 |
| Pfam | PF00815 | Histidinol dehydrogenase | 946 | 1352 | 7.6E-160 | IPR012131 |
| SUPERFAMILY | SSF53720 | ALDH-like | 955 | 1352 | 3.53E-72 | IPR016161 |
| Gene3D | G3DSA:3.40.50.1980 | Nitrogenase molybdenum iron protein domain | 1160 | 1303 | 1.5E-144 | - |
| Gene3D | G3DSA:3.40.50.1980 | Nitrogenase molybdenum iron protein domain | 957 | 1313 | 1.5E-144 | - |
| Gene3D | G3DSA:1.20.5.1300 | - | 1023 | 1352 | 1.5E-144 | - |
| TIGRFAM | TIGR00069 | hisD: histidinol dehydrogenase | 958 | 1351 | 2.4E-149 | IPR012131 |
| ProSitePatterns | PS00611 | Histidinol dehydrogenase signature. | 1154 | 1186 | - | IPR001692 |
| PRINTS | PR00083 | Histidinol dehydrogenase signature | 1092 | 1118 | 1.8E-97 | IPR012131 |
| PRINTS | PR00083 | Histidinol dehydrogenase signature | 958 | 982 | 1.8E-97 | IPR012131 |
| PRINTS | PR00083 | Histidinol dehydrogenase signature | 1122 | 1147 | 1.8E-97 | IPR012131 |
| PRINTS | PR00083 | Histidinol dehydrogenase signature | 1057 | 1083 | 1.8E-97 | IPR012131 |
| PRINTS | PR00083 | Histidinol dehydrogenase signature | 1154 | 1175 | 1.8E-97 | IPR012131 |
| PRINTS | PR00083 | Histidinol dehydrogenase signature | 1286 | 1304 | 1.8E-97 | IPR012131 |
| PRINTS | PR00083 | Histidinol dehydrogenase signature | 1176 | 1195 | 1.8E-97 | IPR012131 |
| PRINTS | PR00083 | Histidinol dehydrogenase signature | 1245 | 1270 | 1.8E-97 | IPR012131 |
| Hamap | MF_01024 | Histidinol dehydrogenase [hisD]. | 933 | 1353 | 64.848671 | IPR012131 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 28 | - | - |
| Coils | Coil | Coil | 1338 | 1358 | - | - |
| Coils | Coil | Coil | 464 | 484 | - | - |
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63890.1 | histidinol dehydrogenase. Encodes histidinol dehydrogenase. Up-regulated in response to UV-B. | 5.54E-249 |
| RefSeq | XP_004981522.1 | WPP domain-associated protein [Setaria italica] | 0 |
| Q5NAY4 | Histidinol dehydrogenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=HDH PE=2 SV=1 | 5.06E-287 | |
| TrEMBL | K4A637 | WPP domain-associated protein OS=Setaria italica OX=4555 GN=101768241 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg1489 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_23447 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah004930 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g001220 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg29463, Sbi_jg3711 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg6267 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00000749 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl10721, Sgl16076 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000011615, gene:ENSEOMG00000025632 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.4AG0000830, CQ.Regalona.r1.4BG0000100 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30077100, pistato.v30077300 |
| Apiaceae | Apium graveolens | 1 | Ag7G01322 |
| Arecaceae | Cocos nucifera | 1 | COCNU_14G008930 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103710491 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_01.3250.V1.1, AsparagusV1_07.3475.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri17G05373, Ftri6G33859 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G63890.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10004035m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g26950.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB06g012140.2N, BniB07g042570.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G1974 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl07G2112, Cgl07G2121, Cgl07G2169 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno17g03800 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0217s00001.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate06g06910 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.481 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00014733, Pov_00037450 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb5G27597 |
| Poaceae | Echinochloa crus-galli | 2 | AH01.123, BH03.3863 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0213550, gene-QOZ80_3BG0258670 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0165510.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_043713 |
| Poaceae | Oryza coarctata | 2 | Oco01G005940, Oco02G006020 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g13190.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_01G058900, gene-BS78_01G219800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0302857, Pt_Chr0302926 |
| Poaceae | Sporobolus alterniflorus | 8 | Chr01G003430, Chr04G030010, Chr0G012730, Chr0G020610 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G519300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG042300, gene_TRIDC2BG045390 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G292100.1, TraesCS2B02G308600.3 ... |
| Poaceae | Zea mays | 1 | Zm00001eb059830_P005 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-15264, nbis-gene-15266, nbis-gene-16395 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g2629 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG04.2014, evm.TU.LG06.311 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g05480 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_14_RagTag.990 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-16835 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13064 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17284 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000025l.142 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00012275 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-8619 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-22990 |
| Salicaceae | Populus euphratica | 2 | populus_peu00070, populus_peu17142 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132623324 |
| Solanaceae | Solanum chilense | 1 | SOLCI003514500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107011402 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.26483_chr11_+, STRG.8703_chr06_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC09G2436 |
| Zosteraceae | Zostera marina | 1 | Zosma02g17900.v3.1 |