halophFGD

Basic Information

Locus ID: BH03.3478

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
BH03	43735065	43738169	+	BH03.3478

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.48	82,332.24 Da	49.37	77.50	-0.16

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF81383	F-box domain	317	385	4.25E-10	IPR036047
MobiDBLite	mobidb-lite	consensus disorder prediction	280	309	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_025804146.1	uncharacterized protein LOC112883128 isoform X2 [Panicum hallii]	1.13E-200
TrEMBL	A0A1E5VHT0	F-box domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0014292 PE=4 SV=1	2.31E-217

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	15	AH03.3307, AH03.3328, AH03.3352, AH05.4107, BH03.3220 ... BH03.3478, BH03.3490, BH03.3511, BH05.4116, BH05.4121, BH05.4122, CH03.3721, CH05.4339, CH05.4340, CH05.4346
Poaceae	Eleusine coracana subsp. coracana	27	gene-QOZ80_5AG0397670, gene-QOZ80_5AG0397800 ... gene-QOZ80_5AG0397820, gene-QOZ80_5BG0446170, gene-QOZ80_7AG0571450, gene-QOZ80_7AG0571460, gene-QOZ80_7AG0571480, gene-QOZ80_7AG0571490, gene-QOZ80_7AG0571800, gene-QOZ80_7AG0571840, gene-QOZ80_7AG0572040, gene-QOZ80_7AG0572050, gene-QOZ80_7AG0572070, gene-QOZ80_7AG0572110, gene-QOZ80_7AG0572130, gene-QOZ80_7AG0572150, gene-QOZ80_7AG0572170, gene-QOZ80_7BG0603100, gene-QOZ80_7BG0603120, gene-QOZ80_7BG0603170, gene-QOZ80_7BG0603510, gene-QOZ80_7BG0603520, gene-QOZ80_7BG0603530, gene-QOZ80_7BG0603550, gene-QOZ80_7BG0603570, gene-QOZ80_7BG0603590, gene-QOZ80_UnG0727510
Poaceae	Hordeum vulgare	8	HORVU.MOREX.r3.2HG0136340.1.CDS1 ... HORVU.MOREX.r3.7HG0644510.1.CDS1, HORVU.MOREX.r3.7HG0744300.1.CDS1, HORVU.MOREX.r3.7HG0744330.1.CDS1, HORVU.MOREX.r3.7HG0744390.1.CDS1, HORVU.MOREX.r3.7HG0744500.1.CDS1, HORVU.MOREX.r3.7HG0749430.1.CDS1, HORVU.MOREX.r3.7HG0749440.1.CDS1
Poaceae	Lolium multiflorum	9	gene-QYE76_018247, gene-QYE76_019531, gene-QYE76_019533 ... gene-QYE76_021019, gene-QYE76_036656, gene-QYE76_036658, gene-QYE76_036672, gene-QYE76_039120, gene-QYE76_040248
Poaceae	Oryza coarctata	6	Oco03G009990, Oco07G002030, Oco13G009760, Oco14G010360 ... Oco14G010370, Oco14G010390
Poaceae	Oryza sativa	7	LOC_Os07g36830.1, LOC_Os07g36840.1, LOC_Os07g36870.1 ... LOC_Os07g36880.1, LOC_Os07g36910.2, LOC_Os07g36920.1, LOC_Os10g04590.1
Poaceae	Paspalum vaginatum	22	gene-BS78_02G246000, gene-BS78_02G307200, gene-BS78_K058400 ... gene-BS78_02G308200, gene-BS78_02G310800, gene-BS78_02G310900, gene-BS78_02G311000, gene-BS78_02G311100, gene-BS78_02G311400, gene-BS78_03G374400, gene-BS78_05G063900, gene-BS78_08G142300, gene-BS78_08G143700, gene-BS78_08G144300, gene-BS78_08G144900, gene-BS78_08G145300, gene-BS78_08G145400, gene-BS78_08G145500, gene-BS78_08G145700, gene-BS78_08G145900, gene-BS78_08G146000, gene-BS78_09G059500
Poaceae	Puccinellia tenuiflora	16	Pt_Chr0201154, Pt_Chr0304282, Pt_Chr0305056, Pt_Chr0401573 ... Pt_Chr0401586, Pt_Chr0401588, Pt_Chr0401590, Pt_Chr0401591, Pt_Chr0401594, Pt_Chr0401595, Pt_Chr0402988, Pt_Chr0500826, Pt_Chr0500920, Pt_Chr0504869, Pt_Chr0504877, Pt_Chr0600564
Poaceae	Sporobolus alterniflorus	12	Chr02G018260, Chr02G018840, Chr04G018950, Chr05G015670 ... Chr13G002690, Chr24G009760, Chr24G009810, Chr27G012610, Chr27G012630, Chr28G009140, Chr28G009150, Chr28G009160
Poaceae	Thinopyrum elongatum	19	Tel2E01G261800, Tel2E01G262200, Tel2E01G392900 ... Tel2E01G826100, Tel2E01G943900, Tel2E01G944100, Tel6E01G649400, Tel7E01G1002600, Tel7E01G140400, Tel7E01G140900, Tel7E01G884000, Tel7E01G885400, Tel7E01G885600, Tel7E01G886000, Tel7E01G887600, Tel7E01G890300, Tel7E01G891700, Tel7E01G893400, Tel7E01G989200
Poaceae	Triticum dicoccoides	12	gene_TRIDC1BG042210, gene_TRIDC2AG027420 ... gene_TRIDC2AG073230, gene_TRIDC2BG031510, gene_TRIDC2BG031550, gene_TRIDC4AG062770, gene_TRIDC4AG062790, gene_TRIDC4AG062800, gene_TRIDC7AG007150, gene_TRIDC7AG072010, gene_TRIDC7AG072200, gene_TRIDC7BG067890
Poaceae	Triticum aestivum	60	TraesCS1B02G258500.1.cds1, TraesCS2A02G104300.1 ... TraesCS2A02G124500.1, TraesCS2A02G125000.1, TraesCS2A02G209300.1.cds1, TraesCS2A02G552600.1, TraesCS2A02G553200.1.cds1, TraesCS2B02G146300.1.cds1, TraesCS2B02G146400.1, TraesCS2B02G147000.1, TraesCS2B02G235300.1.cds1, TraesCS2B02G235500.1.cds1, TraesCS2B02G583400.1, TraesCS2B02G584900.1.cds1, TraesCS2D02G127300.1.cds1, TraesCS2D02G127400.1.cds1, TraesCS2D02G216100.1.cds1, TraesCS4A02G423200.1.cds1, TraesCS4A02G423300.1.cds1, TraesCS4A02G423400.1.cds1, TraesCS6A02G040900.1, TraesCS6B02G398800.1.cds1, TraesCS6D02G046800.1.cds1, TraesCS6D02G347400.1.cds1, TraesCS6D02G347700.1.cds1, TraesCS7A02G066600.1, TraesCS7A02G066700.1, TraesCS7A02G066800.1.cds1, TraesCS7A02G512500.1.cds1, TraesCS7A02G514000.1.cds1, TraesCS7A02G563900.1.cds1, TraesCS7A02G564100.1.cds1, TraesCS7B02G416900.1.cds1, TraesCS7B02G424300.1.cds1, TraesCS7B02G424800.1.cds1, TraesCS7B02G426100.1, TraesCS7B02G426500.1.cds1, TraesCS7B02G427000.1, TraesCS7B02G427600.1, TraesCS7B02G427700.1.cds1, TraesCS7B02G427900.1, TraesCS7B02G428100.1.cds1, TraesCS7B02G428400.1.cds1, TraesCS7B02G428800.1, TraesCS7B02G429000.1.cds1, TraesCS7B02G452700.1.cds1, TraesCS7B02G498700.1.cds1, TraesCS7D02G060800.1.cds1, TraesCS7D02G061000.1.cds1, TraesCS7D02G061100.1.cds1, TraesCS7D02G061200.1.cds1, TraesCS7D02G398400.1.cds1, TraesCS7D02G398500.1.cds1, TraesCS7D02G502200.1.cds1, TraesCS7D02G503200.1.cds1, TraesCS7D02G504700.1, TraesCS7D02G546800.1.cds1, TraesCS7D02G546900.1.cds1, TraesCSU02G087300.1, TraesCSU02G094400.1.cds1
Poaceae	Zea mays	2	Zm00001eb323630_P001, Zm00001eb323800_P001
Poaceae	Zoysia japonica	6	nbis-gene-1001, nbis-gene-10662, nbis-gene-10663 ... nbis-gene-10694, nbis-gene-58623, nbis-gene-733
Poaceae	Zoysia macrostachya	2	Zma_g5311, Zma_g5327