Basic Information
Locus ID:
BH03.3427
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 43287727 | 43290973 | + | BH03.3427 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 57,638.86 Da | 39.14 | 86.96 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 121 | 198 | 3.6E-9 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 305 | 481 | 2.2E-25 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 247 | 508 | 4.05E-57 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 300 | 494 | 6.2E-53 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 1 | 94 | 5.9E-9 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 116 | 205 | 7.5E-15 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 247 | 299 | 7.8E-7 | - |
| SMART | SM00220 | serkin_6 | 262 | 482 | 3.6E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 182 | 489 | 22.859638 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1 | 94 | 11.301997 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 103 | 211 | 13.221042 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 333 | 345 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.3 | - | 1.43E-95 |
| RefSeq | XP_039796401.1 | cysteine-rich receptor-like protein kinase 10 [Panicum virgatum] | 5.46E-296 |
| Q8GWJ7 | Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana OX=3702 GN=CRK19 PE=1 SV=2 | 6.17E-88 | |
| TrEMBL | K4A2U1 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 3.32E-299 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH03.3240, BH03.3426, BH03.3427, CH03.3631, CH03.3633 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_7AG0570290, gene-QOZ80_7AG0570300 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0139060.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_040836 |
| Poaceae | Oryza coarctata | 2 | Oco13G009190, Oco13G009200 |
| Poaceae | Oryza sativa | 2 | LOC_Os07g12850.1, LOC_Os07g34980.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G300600, gene-BS78_02G300700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0304217 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr19G005280, Chr24G009130, Chr28G008530 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G405900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG028910, gene_TRIDC2BG032640 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G217500.1, TraesCS2B02G243000.1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb106340_P001, Zm00001eb323200_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-820 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g6569, Zma_g6571 |