Basic Information
Locus ID:
BH03.321
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 4283635 | 4290308 | + | BH03.321 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 100,730.26 Da | 52.32 | 70.12 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14291 | Domain of unknown function (DUF4371) | 317 | 492 | 8.2E-39 | IPR025398 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 823 | 863 | 2.07E-5 | IPR036875 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 818 | 834 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 794 | 814 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 765 | 834 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 765 | 781 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 139 | - | - |
| Coils | Coil | Coil | 744 | 771 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19260.1 | TTF-type zinc finger protein with HAT dimerisation domain. | 4.2E-32 |
| RefSeq | XP_045089589.1 | zinc finger MYM-type protein 1-like [Aegilops tauschii subsp. strangulata] | 4.12E-73 |
| Q5SVZ6 | Zinc finger MYM-type protein 1 OS=Homo sapiens OX=9606 GN=ZMYM1 PE=1 SV=1 | 1.12E-11 | |
| TrEMBL | A0A3L6PZ27 | DUF4371 domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM17G05400 PE=4 SV=1 | 2.75E-99 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 11 | AH03.1681, BH02.1694, BH03.321, BH04.871, BH07.2625 ... |
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_3AG0221350, gene-QOZ80_3BG0267940 ... |
| Poaceae | Oryza coarctata | 4 | Oco03G007240, Oco10G013850, Oco11G010490, Oco19G003500 |
| Poaceae | Paspalum vaginatum | 6 | gene-BS78_06G044000, gene-BS78_08G060500, gene-BS78_K024200 ... |
| Poaceae | Sporobolus alterniflorus | 9 | Chr01G030640, Chr01G034250, Chr03G009660, Chr05G004500 ... |
| Poaceae | Zea mays | 1 | Zm00001eb384270_P001 |
| Poaceae | Zoysia japonica | 11 | nbis-gene-1295, nbis-gene-27399, nbis-gene-33913 ... |