Basic Information
Locus ID:
BH03.3158
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 40959523 | 40961147 | + | BH03.3158 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 55,017.23 Da | 50.71 | 81.91 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08246 | Cathepsin propeptide inhibitor domain (I29) | 50 | 105 | 4.9E-7 | IPR013201 |
| Pfam | PF00069 | Protein kinase domain | 320 | 482 | 6.7E-20 | IPR000719 |
| Pfam | PF00112 | Papain family cysteine protease | 130 | 200 | 7.4E-18 | IPR000668 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 48 | 191 | 1.82E-34 | IPR038765 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 228 | 485 | 2.11E-51 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 320 | 504 | 5.8E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 219 | 319 | 8.3E-12 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 45 | 207 | 3.1E-38 | - |
| SMART | SM00848 | Inhibitor_I29_2 | 50 | 106 | 7.9E-16 | IPR013201 |
| SMART | SM00220 | serkin_6 | 226 | 482 | 8.8E-38 | IPR000719 |
| SMART | SM00645 | pept_c1 | 130 | 300 | 1.8E-6 | IPR000668 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 226 | 482 | 23.170586 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 329 | 341 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 232 | 255 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54940.3 | - | 6.12E-43 |
| RefSeq | XP_025791573.1 | putative cyclin-dependent kinase F-2 [Panicum hallii] | 6.78E-131 |
| Q8VYS0 | Probable cysteine protease RD19D OS=Arabidopsis thaliana OX=3702 GN=RD19D PE=2 SV=1 | 4.83E-41 | |
| TrEMBL | A0A1E5VMD2 | Putative cyclin-dependent kinase F-2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0012689 PE=3 SV=1 | 5.94E-132 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology