Basic Information
Locus ID:
BH03.3024
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 39543309 | 39553725 | - | BH03.3024 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 106,532.58 Da | 42.64 | 77.50 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 37 | 385 | 2.08885E-140 | - |
| Pfam | PF00069 | Protein kinase domain | 48 | 188 | 8.3E-19 | IPR000719 |
| Pfam | PF01119 | DNA mismatch repair protein, C-terminal domain | 543 | 662 | 2.1E-10 | IPR013507 |
| Pfam | PF00069 | Protein kinase domain | 262 | 349 | 5.7E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 41 | 387 | 5.09E-67 | IPR011009 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 551 | 665 | 9.1E-13 | IPR020568 |
| Gene3D | G3DSA:3.30.230.10 | - | 520 | 673 | 3.4E-24 | IPR014721 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 33 | 132 | 1.6E-100 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 101 | 385 | 1.6E-100 | - |
| SMART | SM00220 | serkin_6 | 47 | 460 | 1.1E-38 | IPR000719 |
| SMART | SM01340 | DNA_mis_repair_2 | 529 | 665 | 2.0E-8 | IPR013507 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 47 | 419 | 28.287094 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 53 | 76 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 174 | 186 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 437 | 451 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 455 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17530.1 | Protein kinase superfamily protein. | 4.94E-185 |
| RefSeq | XP_002462800.1 | SRSF protein kinase 1 [Sorghum bicolor] | 1.17E-256 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 1.07E-82 | |
| TrEMBL | A0A3L6T676 | Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM03G05670 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology