Basic Information
Locus ID:
BH03.2993
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
DWNN domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 39266468 | 39267829 | - | BH03.2993 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.38 | 35,781.28 Da | 51.13 | 69.38 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08783 | DWNN domain | 3 | 42 | 1.9E-5 | IPR014891 |
| Pfam | PF08783 | DWNN domain | 90 | 169 | 1.7E-15 | IPR014891 |
| Pfam | PF13696 | Zinc knuckle | 241 | 261 | 6.3E-10 | IPR025829 |
| Gene3D | G3DSA:4.10.60.10 | - | 238 | 285 | 1.1E-10 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 85 | 171 | 5.7E-15 | - |
| SMART | SM01180 | DWNN_2 | 3 | 80 | 0.0041 | IPR014891 |
| SMART | SM01180 | DWNN_2 | 90 | 169 | 8.0E-31 | IPR014891 |
| ProSiteProfiles | PS51282 | DWNN domain profile. | 90 | 169 | 13.917106 | IPR014891 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 208 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47430.3 | DWNN domain, a CCHC-type zinc finger. | 4.48E-25 |
| RefSeq | XP_004987008.1 | E3 ubiquitin ligase PQT3-like [Setaria italica] | 3.73E-116 |
| B9DFV2 | E3 ubiquitin ligase PQT3-like OS=Arabidopsis thaliana OX=3702 GN=At5g47430 PE=1 SV=1 | 1.1E-23 | |
| TrEMBL | K4AJG4 | DWNN domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 7.68E-115 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology