HalophFGD

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Basic Information
Locus ID: BH03.2991
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: DWNN domain
Maps and Mapping Data
Chromosome Start End Strand ID
BH03 39261901 39263336 - BH03.2991
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.65 21,296.89 Da 49.71 45.73 -0.62
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 52 94 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 20 - -
MobiDBLite mobidb-lite consensus disorder prediction 45 115 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 16 - -
KEGG Pathway
KO Term:
K10624 (E3 ubiquitin-protein ligase RBBP6 [EC:2.3.2.27])
Best hit
Source Best Hit ID Description E-value
RefSeq XP_034570947.1 E3 ubiquitin ligase PQT3-like [Setaria viridis] 8.82E-55
TrEMBL A0A2S3H5V3 DWNN domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_3G026400 PE=4 SV=1 6.81E-56
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 12 AH01.1356, AH01.924, AH02.4301, BH01.1054, BH01.1300 ...
BH02.4333, BH03.2991, BH03.2993, CH01.1101, CH01.1350, CH02.4377, CH03.3185
Poaceae Eleusine coracana subsp. coracana 6 gene-QOZ80_3AG0223040, gene-QOZ80_3AG0247010 ...
gene-QOZ80_3AG0247320, gene-QOZ80_3BG0267730, gene-QOZ80_3BG0280930, gene-QOZ80_3BG0281220
Poaceae Hordeum vulgare 5 HORVU.MOREX.r3.3HG0294780.1.CDS1 ...
HORVU.MOREX.r3.3HG0294790.1.CDS1, HORVU.MOREX.r3.3HG0294810.1.CDS1, HORVU.MOREX.r3.3HG0294820.1.CDS1, HORVU.MOREX.r3.4HG0333260.1
Poaceae Lolium multiflorum 3 gene-QYE76_024409, gene-QYE76_063238, gene-QYE76_065995
Poaceae Oryza coarctata 4 Oco05G012820, Oco06G013590, Oco06G013660, Oco06G020340
Poaceae Oryza sativa 2 LOC_Os03g21570.1, LOC_Os03g45730.1
Poaceae Paspalum vaginatum 2 gene-BS78_01G137200, gene-BS78_01G363000
Poaceae Puccinellia tenuiflora 4 Pt_Chr0104603, Pt_Chr0104637, Pt_Chr0300664, Pt_Chr0300666
Poaceae Sporobolus alterniflorus 8 Chr01G033900, Chr04G025380, Chr07G024130, Chr12G005490 ...
Chr12G005730, Chr12G028250, Chr19G007250, Chr27G009580
Poaceae Thinopyrum elongatum 1 Tel4E01G036800
Poaceae Triticum dicoccoides 2 gene_TRIDC4AG045680, gene_TRIDC4BG002770
Poaceae Triticum aestivum 4 TraesCS3D02G321100.1.cds1, TraesCS4A02G297700.1 ...
TraesCS4B02G016000.1, TraesCS4D02G014400.1
Poaceae Zea mays 2 Zm00001eb052630_P001, Zm00001eb218140_P001
Poaceae Zoysia japonica 2 nbis-gene-20554, nbis-gene-39492
Poaceae Zoysia macrostachya 1 Zma_g3134
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.