HalophFGD

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Basic Information
Locus ID: BH03.2855
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
BH03 38138663 38140030 + BH03.2855
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.45 48,595.79 Da 47.16 75.93 -0.31
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 83 220 4.6E-15 IPR017451
MobiDBLite mobidb-lite consensus disorder prediction 1 38 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_020192259.1 uncharacterized protein LOC109778117 [Aegilops tauschii subsp. strangulata] 6.07E-34
TrEMBL A0A811N5Y8 DUF295 domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS12294 PE=4 SV=1 1.62E-139
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda aralocaspica 1 GOSA_00009102
Poaceae Echinochloa crus-galli 2 BH03.2855, CH03.3061
Poaceae Eleusine coracana subsp. coracana 1 gene-QOZ80_6BG0482460
Poaceae Lolium multiflorum 16 gene-QYE76_006814, gene-QYE76_006815, gene-QYE76_006817 ...
gene-QYE76_006818, gene-QYE76_006819, gene-QYE76_006820, gene-QYE76_006821, gene-QYE76_006822, gene-QYE76_006823, gene-QYE76_006824, gene-QYE76_006825, gene-QYE76_007078, gene-QYE76_012643, gene-QYE76_012644, gene-QYE76_021755, gene-QYE76_053756
Poaceae Triticum aestivum 1 TraesCS5D02G310700.1.cds1
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