Basic Information
Locus ID:
BH03.2719
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CPK24
Description:
EF hand
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 37021537 | 37024559 | - | BH03.2719 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 62,745.93 Da | 44.87 | 78.20 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 86 | 349 | 1.07905E-115 | - |
| CDD | cd00051 | EFh | 472 | 531 | 8.68399E-16 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 87 | 350 | 8.4E-63 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 472 | 530 | 1.9E-12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 398 | 457 | 5.3E-8 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 85 | 361 | 1.13E-75 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 388 | 543 | 2.47E-41 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 89 | 177 | 1.4E-19 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 391 | 459 | 1.0E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 178 | 361 | 6.5E-58 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 368 | 530 | 1.0E-47 | - |
| SMART | SM00054 | efh_1 | 433 | 461 | 11.0 | IPR002048 |
| SMART | SM00054 | efh_1 | 469 | 497 | 0.0043 | IPR002048 |
| SMART | SM00054 | efh_1 | 505 | 533 | 1.3E-4 | IPR002048 |
| SMART | SM00220 | serkin_6 | 87 | 350 | 3.4E-83 | IPR000719 |
| SMART | SM00054 | efh_1 | 397 | 425 | 0.067 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 429 | 464 | 8.487999 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 87 | 350 | 43.876896 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 465 | 500 | 13.788124 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 393 | 428 | 14.122869 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 501 | 536 | 12.504936 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 514 | 526 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 406 | 418 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 212 | 224 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 478 | 490 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 93 | 116 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 5.48E-187 |
| RefSeq | XP_004957332.1 | calcium-dependent protein kinase 22 [Setaria italica] | 0 |
| Q69IM9 | Calcium-dependent protein kinase 22 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK22 PE=3 SV=1 | 3.27E-258 | |
| TrEMBL | K3ZS19 | Calcium-dependent protein kinase 24 OS=Setaria italica OX=4555 GN=101754008 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology