Basic Information
Locus ID:
BH03.2470
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Glycosyl transferase family 8
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 35022087 | 35025785 | + | BH03.2470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.60 | 94,082.27 Da | 47.51 | 76.77 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 537 | 831 | 8.02361E-121 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 506 | 817 | 1.3E-88 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 537 | 843 | 7.03E-67 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 540 | 834 | 1.8E-43 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 390 | - | - |
| Coils | Coil | Coil | 468 | 488 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 2.91E-225 |
| RefSeq | XP_034582201.1 | probable galacturonosyltransferase 4 isoform X1 [Setaria viridis] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 2.8E-224 | |
| TrEMBL | A0A4U6W024 | Hexosyltransferase OS=Setaria viridis OX=4556 GN=SEVIR_2G258300v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology