halophFGD

Basic Information

Locus ID: BH03.2467

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: BTB/POZ domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
BH03	35006593	35007021	-	BH03.2467

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.90	15,804.03 Da	39.93	94.16	-0.16

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd18186	BTB_POZ_ZBTB_KLHL-like	7	89	1.01709E-21	-
CDD	cd14733	BACK	107	136	3.9524E-4	-
Pfam	PF00651	BTB/POZ domain	3	102	9.1E-20	IPR000210
SUPERFAMILY	SSF54695	POZ domain	1	104	2.77E-21	IPR011333
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	1	137	3.0E-34	IPR011333
SMART	SM00225	BTB_4	8	106	8.4E-17	IPR000210
ProSiteProfiles	PS50097	BTB domain profile.	8	67	14.087487	IPR000210

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT1G55760.1	BTB/POZ domain-containing protein.	1.11E-45
RefSeq	XP_051212300.1	BTB/POZ domain-containing protein At1g55760-like [Lolium perenne]	1.82E-50
Swiss-Prot	Q680K8	BTB/POZ domain-containing protein At1g55760 OS=Arabidopsis thaliana OX=3702 GN=At1g55760 PE=2 SV=1	1.08E-44
TrEMBL	A0A3L6QSN1	POZ domain protein OS=Panicum miliaceum OX=4540 GN=C2845_PM04G19350 PE=4 SV=1	1.43E-62

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	4	AH03.2335, BH03.2467, BH03.2468, CH03.2658
Poaceae	Eleusine coracana subsp. coracana	1	gene-QOZ80_6AG0539000