Basic Information
Locus ID:
BH03.2306
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 33508729 | 33510084 | - | BH03.2306 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.91 | 48,521.34 Da | 48.97 | 80.60 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 87 | 397 | 6.3E-59 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 82 | 411 | 4.05E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 80 | 184 | 4.8E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 185 | 433 | 5.1E-55 | - |
| SMART | SM00220 | serkin_6 | 87 | 397 | 3.5E-82 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 87 | 397 | 42.816845 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 93 | 116 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 219 | 231 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63370.2 | Protein kinase superfamily protein. | 7.34E-41 |
| RefSeq | XP_039834576.1 | uncharacterized protein LOC120695373 [Panicum virgatum] | 7.37E-172 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 2.1E-70 | |
| TrEMBL | A0A8T0VKG4 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2NG342900 PE=3 SV=1 | 4.21E-201 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH03.2306 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_005440 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G376800 |
| Poaceae | Triticum aestivum | 2 | TraesCS5A02G231900.1.cds1, TraesCS5B02G230200.1.cds1 |