Basic Information
Locus ID:
BH03.1789
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 27929486 | 27934162 | - | BH03.1789 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.80 | 71,349.60 Da | 56.51 | 78.64 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 68 | 546 | 1.2E-37 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 59 | 566 | 1.11E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 432 | 621 | 1.0E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 48 | 139 | 7.4E-32 | - |
| SMART | SM00220 | serkin_6 | 63 | 603 | 7.5E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 63 | 663 | 26.350735 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 69 | 91 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 468 | 480 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 631 | 650 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 200 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49270.1 | Protein kinase superfamily protein. | 1.46E-66 |
| RefSeq | XP_008652581.1 | proline-rich receptor-like protein kinase PERK7 [Zea mays] | 8.53E-120 |
| Q9XI96 | Proline-rich receptor-like protein kinase PERK7 OS=Arabidopsis thaliana OX=3702 GN=PERK7 PE=2 SV=1 | 1.42E-65 | |
| TrEMBL | A0A804QAM8 | Protein kinase domain-containing protein OS=Zea mays OX=4577 PE=4 SV=1 | 1.93E-118 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH03.1636, BH03.1789, CH03.1953 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_02G157200, gene-BS78_02G157300 ... |