Basic Information
Locus ID:
BH03.1787
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 27819098 | 27907373 | + | BH03.1787 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 99,926.28 Da | 37.78 | 96.86 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 34 | 268 | 8.02552E-79 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 814 | 905 | 1.5E-16 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 334 | 576 | 3.7E-27 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 34 | 276 | 1.4E-62 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 35 | 269 | 3.68E-63 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 333 | 580 | 3.23E-46 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 783 | 907 | 4.32E-31 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 403 | 591 | 1.5E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 811 | 911 | 1.6E-28 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 31 | 278 | 1.9E-68 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 326 | 402 | 3.3E-16 | - |
| SMART | SM00220 | serkin_6 | 324 | 584 | 1.6E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 686 | 912 | 15.990515 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 323 | 589 | 22.986843 | IPR000719 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 159 | 165 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 874 | 886 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65600.1 | Concanavalin A-like lectin protein kinase family protein. | 2.07E-67 |
| RefSeq | XP_003576432.3 | uncharacterized protein LOC100840345 [Brachypodium distachyon] | 6.91E-158 |
| Q9LSL5 | L-type lectin-domain containing receptor kinase IX.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK92 PE=1 SV=1 | 2.02E-66 | |
| TrEMBL | A0A1E5UYZ2 | Putative L-type lectin-domain containing receptor kinase S.7 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0020977 PE=3 SV=1 | 1.78E-221 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH03.1787, CH03.1958 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.2HG0100870.1.CDS1 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G156100, gene-BS78_05G241600 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0107997 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr14G012180 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G102500, Tel3E01G784700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG004410, gene_TRIDC2AG004420 |
| Poaceae | Triticum aestivum | 11 | TraesCS2B02G054500.1, TraesCS2D02G040700.1 ... |