HalophFGD

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Basic Information
Locus ID: BH03.1759
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
BH03 27409509 27412253 + BH03.1759
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.77 61,929.85 Da 63.91 80.33 -0.33
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 33 93 3.14E-10 IPR036047
MobiDBLite mobidb-lite consensus disorder prediction 19 33 - -
MobiDBLite mobidb-lite consensus disorder prediction 444 469 - -
MobiDBLite mobidb-lite consensus disorder prediction 408 424 - -
MobiDBLite mobidb-lite consensus disorder prediction 440 505 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 37 - -
MobiDBLite mobidb-lite consensus disorder prediction 389 427 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039834502.1 uncharacterized protein LOC120695282 [Panicum virgatum] 3.55E-87
TrEMBL A0A1E5WNF3 F-box domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0000049 PE=4 SV=1 2.3E-122
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 29 AH03.1550, AH03.1552, AH03.1569, AH03.1583, AH03.1587 ...
AH03.1588, AH05.3910, AH05.3912, AH08.1325, BH03.1102, BH03.1726, BH03.1731, BH03.1750, BH03.1752, BH03.1756, BH03.1757, BH03.1759, BH03.1761, BH04.374, BH05.3930, CH03.1882, CH03.1887, CH03.1902, CH03.1903, CH03.1909, CH03.1911, CH03.1912, CH03.1913, CH05.4151
Poaceae Eleusine coracana subsp. coracana 13 gene-QOZ80_5BG0443750, gene-QOZ80_6AG0532110 ...
gene-QOZ80_6AG0532120, gene-QOZ80_6AG0532130, gene-QOZ80_6AG0532180, gene-QOZ80_6AG0532270, gene-QOZ80_6BG0485680, gene-QOZ80_6BG0485700, gene-QOZ80_6BG0485720, gene-QOZ80_6BG0485770, gene-QOZ80_6BG0485780, gene-QOZ80_6BG0485800, gene-QOZ80_7BG0588220
Poaceae Hordeum vulgare 5 HORVU.MOREX.r3.1HG0064930.1.CDS1 ...
HORVU.MOREX.r3.1HG0088780.1.CDS1, HORVU.MOREX.r3.5HG0473390.1, HORVU.MOREX.r3.5HG0473630.1.CDS1, HORVU.MOREX.r3.5HG0473650.1.CDS1
Poaceae Lolium multiflorum 20 gene-QYE76_004511, gene-QYE76_004516, gene-QYE76_004520 ...
gene-QYE76_004521, gene-QYE76_004575, gene-QYE76_004579, gene-QYE76_004584, gene-QYE76_004585, gene-QYE76_004586, gene-QYE76_004587, gene-QYE76_007693, gene-QYE76_007697, gene-QYE76_007699, gene-QYE76_007700, gene-QYE76_015274, gene-QYE76_015276, gene-QYE76_015277, gene-QYE76_015278, gene-QYE76_015279, gene-QYE76_015281
Poaceae Oryza coarctata 8 Oco03G007580, Oco04G007920, Oco17G002730, Oco17G002750 ...
Oco18G002520, Oco18G002580, Oco18G002590, Oco18G002610
Poaceae Oryza sativa 15 LOC_Os02g17480.1, LOC_Os03g26840.1, LOC_Os09g15440.1 ...
LOC_Os09g15530.1, LOC_Os09g15540.1, LOC_Os09g15550.1, LOC_Os09g15560.1, LOC_Os09g15570.1, LOC_Os09g15660.1, LOC_Os09g16810.1, LOC_Os09g17146.1, LOC_Os09g17152.1, LOC_Os09g17190.1, LOC_Os09g17530.1, LOC_Os09g17540.1
Poaceae Paspalum vaginatum 3 gene-BS78_02G151200, gene-BS78_02G151900 ...
gene-BS78_08G118700
Poaceae Puccinellia tenuiflora 7 Pt_Chr0303448, Pt_Chr0502216, Pt_Chr0503635, Pt_Chr0505577 ...
Pt_Chr0505578, Pt_Chr0702622, Pt_Chr0702646
Poaceae Sporobolus alterniflorus 3 Chr09G000330, Chr11G010210, Chr27G007970
Poaceae Thinopyrum elongatum 3 Tel1E01G664100, Tel5E01G310300, Tel5E01G310600
Poaceae Triticum dicoccoides 7 gene_TRIDC1AG038510, gene_TRIDC1AG059200 ...
gene_TRIDC1BG043710, gene_TRIDC1BG043720, gene_TRIDC5AG029670, gene_TRIDC5AG029860, gene_TRIDC5BG031550
Poaceae Triticum aestivum 27 TraesCS1A02G257600.1.cds1, TraesCS1A02G257700.1.cds1 ...
TraesCS1A02G378400.1.cds1, TraesCS1B02G268100.1.cds1, TraesCS1B02G430400.1.cds1, TraesCS1B02G442900.1.cds1, TraesCS1B02G443000.1.cds1, TraesCS1D02G256900.1.cds1, TraesCS1D02G257000.1.cds1, TraesCS1D02G409200.1.cds1, TraesCS3A02G532500.1, TraesCS3B02G446900.1.cds1, TraesCS3B02G609300.1.cds1, TraesCS3B02G609700.1.cds1, TraesCS3D02G537700.1.cds1, TraesCS5A02G182500.1.cds1, TraesCS5A02G183400.1, TraesCS5A02G183500.1.cds1, TraesCS5B02G180600.1.cds1, TraesCS5B02G180700.1.cds1, TraesCS5B02G181600.1.cds1, TraesCS5B02G181800.1.cds1, TraesCS5B02G181900.1.cds1, TraesCS5D02G187000.1.cds1, TraesCS5D02G188500.1.cds1, TraesCSU02G003500.1.cds1, TraesCSU02G218700.1.cds1
Poaceae Zea mays 1 Zm00001eb098120_P001
Poaceae Zoysia japonica 9 nbis-gene-20097, nbis-gene-20098, nbis-gene-20099 ...
nbis-gene-20103, nbis-gene-31069, nbis-gene-35534, nbis-gene-35536, nbis-gene-50864, nbis-gene-55803
Poaceae Zoysia macrostachya 5 Zma_g32372, Zma_g32373, Zma_g32374, Zma_g32375, Zma_g5090
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.