Basic Information
Locus ID:
BH03.1526
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 22659742 | 22660677 | + | BH03.1526 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 33,126.68 Da | 34.48 | 90.74 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 40 | 309 | 2.0E-56 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 33 | 310 | 6.2E-71 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 34 | 129 | 1.1E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 130 | 311 | 1.3E-49 | - |
| SMART | SM00220 | serkin_6 | 40 | 309 | 1.8E-73 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 40 | 309 | 41.629589 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 46 | 69 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67580.1 | Protein kinase superfamily protein. | 6.05E-43 |
| RefSeq | XP_004956445.1 | putative cyclin-dependent kinase F-2 [Setaria italica] | 6.1E-197 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 6.31E-59 | |
| TrEMBL | A0A3L6TFH9 | Putative cyclin-dependent kinase F-2 OS=Panicum miliaceum OX=4540 GN=C2845_PM03G29700 PE=4 SV=1 | 8.65E-197 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology