Basic Information
Locus ID:
BH03.146
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 1631911 | 1638050 | - | BH03.146 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 109,572.92 Da | 47.07 | 82.35 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 337 | 618 | 2.99595E-83 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 334 | 614 | 1.1E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 314 | 615 | 7.38E-68 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 107 | 259 | 1.36E-5 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 317 | 411 | 2.7E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 412 | 621 | 2.4E-51 | - |
| SMART | SM00220 | serkin_6 | 331 | 616 | 2.9E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 331 | 625 | 35.113815 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 465 | 477 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 337 | 365 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06740.1 | Concanavalin A-like lectin protein kinase family protein. | 1.07E-73 |
| RefSeq | XP_034579179.1 | L-type lectin-domain containing receptor kinase IX.1-like [Setaria viridis] | 0 |
| Q9FG33 | Probable L-type lectin-domain containing receptor kinase S.5 OS=Arabidopsis thaliana OX=3702 GN=LECRKS5 PE=2 SV=1 | 1.04E-72 | |
| TrEMBL | A0A4U6VND0 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G020100v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.131, BH03.146, BH04.1794, CH03.209 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G015000, gene-BS78_08G090500 |