Basic Information
Locus ID:
BH03.1287
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
U-box domain-containing protein 33
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 16866250 | 16873076 | + | BH03.1287 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 94,845.47 Da | 45.49 | 81.07 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 785 | 825 | 3.44087E-21 | - |
| CDD | cd01989 | STK_N | 102 | 221 | 2.43238E-27 | - |
| Pfam | PF00069 | Protein kinase domain | 504 | 755 | 2.3E-43 | IPR000719 |
| Pfam | PF04564 | U-box domain | 781 | 852 | 1.1E-17 | IPR003613 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 477 | 761 | 5.13E-70 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 773 | 851 | 5.12E-23 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 485 | 573 | 4.4E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 574 | 770 | 2.4E-50 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 780 | 852 | 1.5E-25 | IPR013083 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 72 | 213 | 5.0E-5 | IPR014729 |
| SMART | SM00220 | serkin_6 | 501 | 772 | 2.8E-31 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 784 | 847 | 7.4E-24 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 780 | 852 | 26.671551 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 501 | 768 | 33.544941 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 619 | 631 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 336 | - | - |
| Coils | Coil | Coil | 410 | 472 | - | - |
| Coils | Coil | Coil | 358 | 389 | - | - |
| Coils | Coil | Coil | 119 | 139 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 1.58E-153 |
| RefSeq | XP_025804490.1 | U-box domain-containing protein 33-like [Panicum hallii] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 1.53E-152 | |
| TrEMBL | A0A2S3GXS0 | RING-type E3 ubiquitin transferase OS=Panicum hallii OX=206008 GN=PAHAL_2G133700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology