Basic Information
Locus ID:
BH03.1279
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Calcium-binding EGF-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 16729788 | 16734132 | + | BH03.1279 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 83,761.07 Da | 43.41 | 92.99 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 332 | 369 | 6.76515E-4 | - |
| Pfam | PF00069 | Protein kinase domain | 508 | 768 | 1.1E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 507 | 771 | 1.25E-66 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 335 | 373 | 2.6E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 581 | 779 | 9.0E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 484 | 580 | 5.6E-23 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 285 | 334 | 4.0E-6 | - |
| SMART | SM00220 | serkin_6 | 506 | 777 | 5.2E-31 | IPR000719 |
| SMART | SM00179 | egfca_6 | 332 | 378 | 4.1E-4 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 506 | 773 | 34.633259 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 332 | 364 | - | IPR018097 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 625 | 637 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 512 | 534 | - | IPR017441 |
| Coils | Coil | Coil | 763 | 779 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21230.1 | wall associated kinase 5. encodes a wall-associated kinase | 3.03E-99 |
| RefSeq | XP_021320294.1 | wall-associated receptor kinase 4 [Sorghum bicolor] | 0 |
| Q9LMN7 | Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1 | 2.95E-98 | |
| TrEMBL | A0A1B6PGP0 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3007G094100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology