Basic Information
Locus ID:
BH03.1253
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CTR1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 16506839 | 16517873 | - | BH03.1253 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 91,292.72 Da | 45.68 | 84.30 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 508 | 710 | 5.02064E-110 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 503 | 709 | 1.1E-58 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 146 | 349 | 8.6E-72 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 487 | 711 | 2.56E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 495 | 580 | 1.3E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 581 | 746 | 6.3E-48 | - |
| SMART | SM00220 | serkin_6 | 502 | 826 | 6.8E-53 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 502 | 826 | 42.039474 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 508 | 529 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 623 | 635 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 576 | 589 | 3.2E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 683 | 705 | 3.2E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 664 | 674 | 3.2E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 617 | 635 | 3.2E-9 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 6.71E-244 |
| RefSeq | XP_012699069.1 | uncharacterized protein LOC101754395 [Setaria italica] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 6.45E-243 | |
| TrEMBL | A0A1E5VK41 | Serine/threonine-protein kinase CTR1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0013537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology