Basic Information
Locus ID:
BH03.1194
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH03 | 15654925 | 15655858 | - | BH03.1194 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.98 | 28,426.70 Da | 50.16 | 82.45 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 45 | 78 | 2.6E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 42 | 85 | 5.49E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 30 | 82 | 2.6E-7 | - |
| SMART | SM00256 | fbox_2 | 48 | 88 | 0.003 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 42 | 89 | 11.325583 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49030.2 | FBD, F-box and Leucine Rich Repeat domains containing protein. | 2.59E-8 |
| RefSeq | XP_052159788.1 | uncharacterized protein LOC127777254 [Oryza glaberrima] | 3.38E-107 |
| Q9SMU0 | Putative F-box/FBD/LRR-repeat protein At3g49030 OS=Arabidopsis thaliana OX=3702 GN=At3g49030 PE=4 SV=1 | 2.66E-7 | |
| TrEMBL | I1NQ90 | F-box domain-containing protein OS=Oryza glaberrima OX=4538 PE=4 SV=1 | 7.65E-106 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH03.1194, BH03.3927 |
| Poaceae | Thinopyrum elongatum | 4 | Tel5E01G026600, Tel5E01G026700, Tel5E01G026800 ... |