Basic Information
Locus ID:
BH02.574
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 5602122 | 5609149 | + | BH02.574 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.89 | 96,002.95 Da | 57.76 | 61.99 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 862 | 904 | 1.8E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 852 | 905 | 6.82E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 841 | 907 | 2.1E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 863 | 903 | 2.9E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 863 | 904 | 12.931868 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37150.1 | RING/U-box superfamily protein. | 4.3E-30 |
| RefSeq | XP_014660725.1 | E3 ubiquitin-protein ligase MBR1 [Setaria italica] | 1.33E-299 |
| O49500 | E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV=1 | 1.27E-27 | |
| TrEMBL | K3XGL7 | RING-type domain-containing protein OS=Setaria italica OX=4555 GN=101772851 PE=4 SV=1 | 3.02E-298 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology