Basic Information
Locus ID:
BH02.569
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 5576276 | 5579103 | + | BH02.569 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 63,809.92 Da | 33.06 | 86.47 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 32 | 198 | 2.04191E-86 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 396 | 578 | 5.17901E-92 | - |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 29 | 202 | 2.5E-36 | IPR012001 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 442 | 566 | 3.3E-17 | IPR011766 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 231 | 347 | 6.5E-21 | IPR012000 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 396 | 590 | 1.13E-45 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 226 | 372 | 1.29E-32 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 29 | 212 | 3.14E-41 | IPR029061 |
| Gene3D | G3DSA:3.40.50.1220 | - | 221 | 383 | 1.8E-41 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 391 | 577 | 5.9E-59 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 25 | 207 | 2.4E-58 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 23 | 590 | 1.7E-210 | IPR012110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| Coils | Coil | Coil | 168 | 188 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54960.1 | pyruvate decarboxylase-2. pyruvate decarboxylase-2 | 0 |
| RefSeq | XP_025816752.1 | pyruvate decarboxylase 1-like [Panicum hallii] | 0 |
| A2XFI3 | Pyruvate decarboxylase 2 OS=Oryza sativa subsp. indica OX=39946 GN=PDC2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2T7DRF8 | pyruvate decarboxylase OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_5G487600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology