Basic Information
Locus ID:
BH02.4233
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 47350235 | 47354309 | - | BH02.4233 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.12 | 45,739.75 Da | 43.19 | 89.81 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 67 | 329 | 9.3E-119 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 68 | 329 | 3.64E-56 | IPR027417 |
| SUPERFAMILY | SSF54752 | RecA protein, C-terminal domain | 332 | 387 | 2.49E-7 | IPR023400 |
| Gene3D | G3DSA:3.40.50.300 | - | 93 | 397 | 6.7E-111 | IPR027417 |
| SMART | SM00382 | AAA_5 | 117 | 290 | 2.3E-7 | IPR003593 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 64 | 386 | 3.2E-136 | IPR013765 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 263 | 334 | 26.785969 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 95 | 254 | 36.79488 | IPR020588 |
| ProSitePatterns | PS00321 | recA signature. | 275 | 283 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 272 | 300 | 6.9E-77 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 153 | 182 | 6.9E-77 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 359 | 376 | 6.9E-77 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 305 | 334 | 6.9E-77 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 187 | 216 | 6.9E-77 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 225 | 254 | 6.9E-77 | IPR013765 |
| Hamap | MF_00268 | Protein RecA [recA]. | 64 | 391 | 43.319099 | IPR013765 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 62 | - | - |
| Coils | Coil | Coil | 370 | 390 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19490.1 | recA DNA recombination family protein. | 6.25E-177 |
| RefSeq | XP_004970942.1 | DNA repair protein recA homolog 3, mitochondrial [Setaria italica] | 3.48E-273 |
| Q9ZUP2 | DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g19490 PE=2 SV=2 | 6.0E-176 | |
| TrEMBL | K3XI24 | DNA repair protein recA homolog 3, mitochondrial OS=Setaria italica OX=4555 GN=101781240 PE=3 SV=1 | 7.87E-272 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology