Basic Information
Locus ID:
BH02.401
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 3959136 | 3962264 | - | BH02.401 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.66 | 22,777.70 Da | 59.10 | 69.75 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 55 | 193 | 1.06182E-72 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 56 | 192 | 4.1E-51 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 44 | 198 | 6.18E-63 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 47 | 196 | 9.4E-66 | IPR016135 |
| SMART | SM00212 | ubc_7 | 55 | 198 | 2.3E-66 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 52 | 198 | 59.43882 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 125 | 140 | - | IPR023313 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02760.1 | ubiquiting-conjugating enzyme 2. ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. | 2.61E-108 |
| RefSeq | NP_001400039.1 | Ubiquitin-conjugating enzyme E2 2 isoform 2 [Zea mays] | 3.23E-116 |
| P42745 | Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 SV=1 | 2.5E-107 | |
| TrEMBL | A0A1D6LKH6 | Ubiquitin-conjugating enzyme E2 2 OS=Zea mays OX=4577 GN=100284762 PE=3 SV=1 | 7.32E-115 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology