Basic Information
Locus ID:
BH02.3530
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
HMT3
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 41737760 | 41739471 | + | BH02.3530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 36,977.05 Da | 43.12 | 87.66 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 29 | 333 | 8.4E-69 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 25 | 336 | 1.96E-71 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 21 | 332 | 1.3E-88 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 265 | 339 | 0.39 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 18 | 149 | 1.1E-5 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 210 | 306 | 200.0 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 16 | 333 | 40.795631 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 2.14E-119 |
| RefSeq | XP_002458576.1 | homocysteine S-methyltransferase 4 [Sorghum bicolor] | 7.48E-172 |
| Q9FUM7 | Homocysteine S-methyltransferase 4 OS=Zea mays OX=4577 GN=HMT-4 PE=2 SV=1 | 4.8E-165 | |
| TrEMBL | A0A1D6NAB1 | Homocysteine S-methyltransferase4 OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d043302 PE=4 SV=1 | 9.26E-163 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology