Basic Information
Locus ID:
BH02.3263
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 39401798 | 39411794 | - | BH02.3263 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.12 | 116,013.98 Da | 41.78 | 96.73 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 736 | 1002 | 5.69882E-89 | - |
| Pfam | PF13855 | Leucine rich repeat | 264 | 323 | 3.7E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 731 | 997 | 2.7E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 145 | 183 | 2.8E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 156 | 495 | 7.94E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 715 | 1026 | 9.16E-77 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 405 | 494 | 3.3E-10 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 806 | 1011 | 5.8E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 302 | 3.3E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 703 | 805 | 4.8E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 303 | 404 | 4.6E-21 | IPR032675 |
| SMART | SM00220 | serkin_6 | 730 | 1002 | 6.7E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 730 | 1002 | 37.558998 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 736 | 758 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 850 | 862 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 2.15E-252 |
| RefSeq | XP_012701538.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Setaria italica] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 2.07E-251 | |
| TrEMBL | K3XE91 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101766119 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology