Basic Information
Locus ID:
BH02.3204
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 38884600 | 38887873 | + | BH02.3204 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 111,857.10 Da | 36.81 | 95.36 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 723 | 1006 | 7.52141E-93 | - |
| Pfam | PF13855 | Leucine rich repeat | 161 | 220 | 9.7E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 504 | 555 | 2.1E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 103 | 147 | 9.4E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 308 | 366 | 1.4E-11 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 720 | 953 | 8.9E-42 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 44 | 84 | 1.2E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 307 | 609 | 1.63E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 714 | 1004 | 1.89E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 78 | 324 | 7.25E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 201 | 305 | 2.5E-23 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 712 | 800 | 2.5E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 200 | 7.9E-39 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 801 | 1026 | 3.7E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 306 | 633 | 2.4E-89 | IPR032675 |
| SMART | SM00220 | serkin_6 | 717 | 1005 | 5.0E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 518 | 542 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 257 | 281 | 8.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 110 | 133 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 184 | 208 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 566 | 590 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 353 | 377 | 5.5 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 717 | 1005 | 35.580238 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 855 | 867 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 723 | 750 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 113 | 126 | 3.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 566 | 579 | 3.6E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1014 | 1048 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 1.77E-97 |
| RefSeq | XP_039812629.1 | receptor-like protein kinase HSL1 [Panicum virgatum] | 1.59E-288 |
| O49545 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1 | 6.45E-63 | |
| TrEMBL | A0A8T0S443 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_5NG490200 PE=3 SV=1 | 1.15E-286 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology