Basic Information
Locus ID:
BH02.3203
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 38867599 | 38870822 | + | BH02.3203 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 109,881.90 Da | 39.92 | 96.64 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 79 | 137 | 3.5E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 152 | 210 | 1.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 273 | 332 | 1.8E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 682 | 969 | 3.7E-43 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 74 | 2.3E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 470 | 522 | 2.4E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 676 | 970 | 9.84E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 378 | 578 | 3.74E-38 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 81 | 430 | 8.63E-68 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 213 | 343 | 1.3E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 763 | 993 | 9.1E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 344 | 600 | 9.9E-70 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 149 | 6.0E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 675 | 762 | 8.6E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 150 | 212 | 3.1E-17 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 198 | 222 | 73.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 485 | 509 | 51.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 679 | 970 | 1.2E-28 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 100 | 124 | 83.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 247 | 271 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 319 | 343 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 272 | 294 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 416 | 444 | 87.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 174 | 197 | 410.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 557 | 579 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 125 | 148 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 533 | 556 | 74.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 679 | 971 | 36.96537 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 685 | 712 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 822 | 834 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 127 | 140 | 7.8E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 533 | 546 | 7.8E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 993 | 1025 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 1.35E-110 |
| RefSeq | XP_025814243.1 | receptor-like protein kinase HSL1 [Panicum hallii] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 1.87E-70 | |
| TrEMBL | A0A2T7DH02 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_5G164900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology