HalophFGD

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Basic Information
Locus ID: BH02.2707
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: F-Box protein
Maps and Mapping Data
Chromosome Start End Strand ID
BH02 34272748 34273908 - BH02.2707
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.51 41,556.18 Da 45.53 91.32 0.18
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 2 46 3.4E-5 IPR036047
Gene3D G3DSA:1.20.1280.50 - 5 45 1.8E-6 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_025817616.1 uncharacterized protein LOC112894200 [Panicum hallii] 2.22E-224
TrEMBL A0A1E5W6U7 DUF295 domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0005869 PE=4 SV=1 8.61E-226
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 54 AH02.2144, AH02.2145, AH02.2146, AH02.2612, AH02.2620 ...
AH04.866, AH04.867, AH04.868, AH05.1334, AH05.1335, AH05.1343, AH05.1344, AH05.1349, AH05.2587, AH05.2588, AH07.1962, AH08.1677, AH08.855, AH09.622, BH01.2799, BH02.2219, BH02.2220, BH02.2707, BH04.1362, BH04.830, BH04.834, BH05.1507, BH05.1509, BH05.1514, BH05.1516, BH05.1517, BH05.1518, BH05.1522, BH05.1523, BH07.1548, BH08.1733, CH01.2151, CH02.2060, CH02.2372, CH03.4619, CH04.1669, CH04.842, CH05.1706, CH05.1708, CH05.1714, CH05.1715, CH05.1716, CH05.1717, CH05.1721, CH05.1722, CH06.2911, CH07.1310, CH08.1868, Contig328.18
Poaceae Eleusine coracana subsp. coracana 24 gene-QOZ80_1AG0021880, gene-QOZ80_1AG0022110 ...
gene-QOZ80_1AG0022120, gene-QOZ80_1AG0022170, gene-QOZ80_1AG0022180, gene-QOZ80_1BG0071840, gene-QOZ80_1BG0072280, gene-QOZ80_1BG0072290, gene-QOZ80_1BG0072300, gene-QOZ80_2AG0111150, gene-QOZ80_2AG0111160, gene-QOZ80_2AG0111190, gene-QOZ80_2AG0111200, gene-QOZ80_2AG0111220, gene-QOZ80_2AG0111230, gene-QOZ80_2BG0164470, gene-QOZ80_2BG0164480, gene-QOZ80_2BG0164570, gene-QOZ80_2BG0164660, gene-QOZ80_2BG0164720, gene-QOZ80_2BG0164730, gene-QOZ80_2BG0164740, gene-QOZ80_6AG0549200, gene-QOZ80_6BG0502750
Poaceae Hordeum vulgare 10 HORVU.MOREX.r3.3HG0267570.1.CDS1 ...
HORVU.MOREX.r3.3HG0277250.1.CDS1, HORVU.MOREX.r3.4HG0336510.1.CDS1, HORVU.MOREX.r3.5HG0421140.1.CDS1, HORVU.MOREX.r3.5HG0421160.1.CDS1, HORVU.MOREX.r3.5HG0421170.1.CDS1, HORVU.MOREX.r3.5HG0421200.1.CDS1, HORVU.MOREX.r3.5HG0424770.1.CDS1, HORVU.MOREX.r3.5HG0424800.1.CDS1, HORVU.MOREX.r3.5HG0424810.1.CDS1
Poaceae Lolium multiflorum 9 gene-QYE76_001037, gene-QYE76_018248, gene-QYE76_038921 ...
gene-QYE76_040249, gene-QYE76_054338, gene-QYE76_054447, gene-QYE76_054448, gene-QYE76_060452, gene-QYE76_060453
Poaceae Oryza coarctata 37 Oco01G011490, Oco01G013360, Oco01G013370, Oco01G016350 ...
Oco01G016960, Oco01G021620, Oco02G013520, Oco02G017180, Oco02G022200, Oco02G022220, Oco03G008820, Oco04G009130, Oco04G009140, Oco04G009150, Oco04G009160, Oco08G003970, Oco09G012500, Oco09G015350, Oco09G015370, Oco09G015380, Oco09G017150, Oco09G017170, Oco09G017220, Oco09G017230, Oco09G017240, Oco09G017250, Oco09G017510, Oco10G012580, Oco10G012590, Oco10G015260, Oco10G015270, Oco10G017360, Oco13G002050, Oco14G002140, Oco22G008680, Oco23G005470, Oco24G005120
Poaceae Oryza sativa 39 LOC_Os01g19280.1, LOC_Os01g33650.1, LOC_Os01g40240.1 ...
LOC_Os01g47130.1, LOC_Os01g48250.1, LOC_Os01g56710.1, LOC_Os01g56740.1, LOC_Os01g56750.1, LOC_Os02g21220.1, LOC_Os02g21230.1, LOC_Os02g21310.1, LOC_Os02g54330.1, LOC_Os05g40430.1, LOC_Os05g40450.1, LOC_Os05g40500.1, LOC_Os05g40510.1, LOC_Os05g40520.1, LOC_Os05g40550.1, LOC_Os05g40570.1, LOC_Os05g40580.1, LOC_Os05g40590.1, LOC_Os05g40610.1, LOC_Os05g40620.1, LOC_Os05g46050.1, LOC_Os05g46060.1, LOC_Os05g46150.1, LOC_Os05g46160.1, LOC_Os05g46170.1, LOC_Os05g46180.1, LOC_Os05g46190.1, LOC_Os05g49490.1, LOC_Os05g49500.1, LOC_Os05g49510.1, LOC_Os05g50020.1, LOC_Os08g27690.1, LOC_Os12g23450.1, LOC_Os12g23460.1, LOC_Os12g23514.1, LOC_Os12g23670.1
Poaceae Paspalum vaginatum 15 gene-BS78_01G196100, gene-BS78_02G166400, gene-BS78_K112000 ...
gene-BS78_03G175100, gene-BS78_03G219400, gene-BS78_04G168500, gene-BS78_05G118300, gene-BS78_05G120500, gene-BS78_05G120800, gene-BS78_06G116900, gene-BS78_09G133600, gene-BS78_09G172800, gene-BS78_09G243800, gene-BS78_09G243900, gene-BS78_K156300
Poaceae Puccinellia tenuiflora 3 Pt_Chr0301124, Pt_Chr0303031, Pt_Chr0304668
Poaceae Sporobolus alterniflorus 11 Chr02G016890, Chr03G009760, Chr05G017090, Chr05G017100 ...
Chr05G017110, Chr05G017120, Chr09G001230, Chr09G001310, Chr09G001320, Chr09G001330, Chr18G008730
Poaceae Thinopyrum elongatum 5 Tel1E01G479100, Tel3E01G364200, Tel3E01G406700 ...
Tel5E01G030600, Tel5E01G031100
Poaceae Triticum dicoccoides 2 gene_TRIDC3AG035780, gene_TRIDC3BG040150
Poaceae Triticum aestivum 30 TraesCS1A02G103400.1.cds1, TraesCS1A02G103700.1.cds1 ...
TraesCS1A02G103800.1.cds1, TraesCS1B02G305300.2, TraesCS1D02G295700.1, TraesCS2D02G218900.1.cds1, TraesCS3A02G209600.1.cds1, TraesCS3A02G239400.1.cds1, TraesCS3B02G239600.1.cds1, TraesCS3B02G268000.1.cds1, TraesCS3D02G212500.1.cds1, TraesCS3D02G239700.1.cds1, TraesCS4D02G039800.1.cds1, TraesCS5A02G013800.1.cds1, TraesCS5A02G014000.1.cds1, TraesCS5A02G381900.1, TraesCS5B02G011500.1.cds1, TraesCS5B02G011600.1.cds1, TraesCS5B02G011900.1.cds1, TraesCS5B02G012700.1, TraesCS5B02G012800.1.cds1, TraesCS5B02G385100.1.cds1, TraesCS5D02G019000.1, TraesCS5D02G019200.1, TraesCS5D02G019300.1, TraesCS5D02G019500.1.cds1, TraesCS6A02G276500.1.cds1, TraesCS6B02G194800.1.cds1, TraesCS6D02G156000.1.cds1, TraesCSU02G210700.1
Poaceae Zea mays 10 Zm00001eb167860_P001, Zm00001eb167880_P001 ...
Zm00001eb167900_P001, Zm00001eb236630_P001, Zm00001eb290000_P001, Zm00001eb290010_P001, Zm00001eb290020_P001, Zm00001eb290060_P001, Zm00001eb290070_P001, Zm00001eb290090_P001
Poaceae Zoysia japonica 4 nbis-gene-29398, nbis-gene-34023, nbis-gene-34025 ...
nbis-gene-45262
Poaceae Zoysia macrostachya 2 Zma_g15275, Zma_g8125
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.