Basic Information
Locus ID:
BH02.2671
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
ORG1
Description:
plastid-lipid-associated protein 14, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 33898572 | 33903679 | + | BH02.2671 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.41 | 71,805.86 Da | 55.26 | 91.74 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 99 | 392 | 6.53E-19 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 206 | 383 | 8.6E-17 | - |
| SMART | SM00220 | serkin_6 | 68 | 381 | 0.0022 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 68 | 381 | 13.757342 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53450.2 | OBP3-responsive gene 1. | 5.41E-249 |
| RefSeq | XP_004969352.1 | probable plastid-lipid-associated protein 14, chloroplastic isoform X1 [Setaria italica] | 0 |
| Q9LV04 | Probable plastid-lipid-associated protein 14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP14 PE=1 SV=1 | 2.16E-247 | |
| TrEMBL | K3XFG8 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101773274 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg2195 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_3297 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah018644 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g052110 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg15102, Sbi_jg55936 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg26416 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00020047 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl01368, Sgl06444, Sgl06445, Sgl06523 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000003531, gene:ENSEOMG00000031170 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0004910, CQ.Regalona.r1.3BG0004940 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30185230 |
| Apiaceae | Apium graveolens | 1 | Ag3G02042 |
| Arecaceae | Cocos nucifera | 2 | contig68919142G000010, scaffold021278G000020 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103713333 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.2832.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G33618 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G53450.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10012882m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g15580.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g031780.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G1609 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G1745 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno02g12620 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate05g19400, gene.Thate07g15780 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-11731 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2900 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00010831 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G21013 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.2571, BH02.2671, CH02.3860 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0027010, gene-QOZ80_1BG0077260 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0276710.1 |
| Poaceae | Oryza coarctata | 2 | Oco01G016130, Oco02G016380 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g46720.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G215900 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0604999 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr02G013940, Chr05G019860 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G402100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG035500, gene_TRIDC3BG039880 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G237400.1, TraesCS3B02G266000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb158040_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-29046 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g8346 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.1528, evm.TU.LG14.786 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc08g13750 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_12_RagTag.854 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-23775 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-14121 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-21587 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000027l.122 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00006352 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-10634 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-21917 |
| Salicaceae | Populus euphratica | 7 | populus_peu28058, populus_peu28059, populus_peu28061 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132632068 |
| Solanaceae | Solanum chilense | 1 | SOLCI000802700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107014389 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_5262 |
| Tamaricaceae | Tamarix chinensis | 1 | TC06G1516 |
| Zosteraceae | Zostera marina | 1 | Zosma01g14660.v3.1 |