Basic Information
Locus ID:
BH02.264
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH02 | 2658294 | 2664934 | + | BH02.264 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 110,175.59 Da | 51.54 | 77.49 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 369 | 453 | 1.06294E-9 | - |
| CDD | cd00028 | B_lectin | 114 | 186 | 1.93461E-17 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 583 | 691 | 2.3E-11 | IPR000719 |
| Pfam | PF01453 | D-mannose binding lectin | 114 | 201 | 8.7E-13 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 380 | 421 | 9.9E-5 | IPR003609 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 113 | 242 | 2.22E-22 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 508 | 693 | 1.15E-27 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 578 | 714 | 4.8E-19 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 60 | 184 | 2.3E-15 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 486 | 577 | 8.8E-17 | - |
| SMART | SM00108 | blect_4 | 52 | 186 | 6.9E-7 | IPR001480 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 62 | 184 | 13.11841 | IPR001480 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 528 | 549 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 989 | 1013 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 987 | 1013 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 705 | 818 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 763 | 796 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 5.23E-48 |
| RefSeq | XP_039846031.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Panicum virgatum] | 0 |
| Q8RWZ5 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 | 5.16E-47 | |
| TrEMBL | A0A8T0S7A6 | Receptor-like serine/threonine-protein kinase OS=Panicum virgatum OX=38727 GN=PVAP13_5KG042600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||